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Software environments (to abstract multiple tools and their versions)

module:env (v3.0.2)
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License: BSD 3-clause (code) and CC BY-SA 4.0 (data)
Creation date: 2015-02-24
Source: GitHub
cID: 032630d041b4fd8a:9b9b3208ac44b891

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Description  

This is our attempt to share automation actions from scientific research projects as unified Python modules with a common CLI and Python API to help researchers and practitioners reuse best practices. Our on-going project is to make the onboarding process as simple as possible via this platform. Please check this CK white paper and don't hesitate to contact us if you have suggestions or feedback!
  • Automation framework: CK
  • Development repository: ck-ml
  • Source: GitHub
  • How to get the stable version from this portal via the CK client:
    pip install cbench
    cb download module:env --version=3.0.2 --all
    ck help env
  • How to get the development version:
    pip install ck
    ck pull repo:ck-ml
    ck help env
  • CK automation actions (CLI with the Python CK API and JSON IO):
    • ck cat env - show the shell script for setting up this env (API)
    • ck clean env - remote env entry and installed package (API)
    • ck delete env - delete env entry (API)
    • ck deps_summary env - extracting summary of all deps (API)
    • ck envsecute env - execute a shell command in the context of a given environment-setting prewrapper (API)
    • ck get_all_versions_in_deps env - get all versions from deps (recursively) (API)
    • ck locate env - return the install_location (if known) (API)
    • ck prune_search_list env - prune search list by no_tags (API)
    • ck refresh env - refresh environment setup (re-setup related software version) (API)
    • ck remove env - delete env entry (API)
    • ck resolve env - resolve all dependencies for a given software (API)
    • ck rm env - delete env entries (API)
    • ck rmtmp env - remove tmp entries (when installation to env entry failed) (API)
    • ck set env - prepare and set environment for a given software (API)
    • ck show env - show all installed software environments (API)
    • ck virtual env - pre-load environment for the shell (API)
    • ck xset env - set env for command line (pre-set various flags) (API)

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